STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078571Protein phosphatase, Mg2+/Mn2+ dependent, 1Bb. (478 aa)    
Predicted Functional Partners:
map3k7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.919
ppm1b
Protein phosphatase, Mg2+/Mn2+ dependent, 1Ba.
  
  
 
0.901
prkaa1
Non-specific serine/threonine protein kinase.
   
 0.522
prkaa2
Non-specific serine/threonine protein kinase.
   
 0.522
arih1
RBR-type E3 ubiquitin transferase.
   
 
 0.520
ENSTRUP00000085001
annotation not available
   
 
 0.474
slc3a1
Solute carrier family 3 member 1.
 
 
  
 0.471
zfand4
Zinc finger, AN1-type domain 4.
   
 0.460
prkab1
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
   
 0.459
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 0.459
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.