STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000063072Sex comb on midleg-like protein 4 isoform X1. (159 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.629
rybp
RING1 and YY1 binding protein b.
    
 0.473
LOC101070310
YY1 associated factor 2.
    
 0.473
YAF2
YY1 associated factor 2.
    
 0.473
tfdp1
Transcription factor.
   
 0.470
setd7
SET domain containing 7, histone lysine methyltransferase.
   
 0.451
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.451
mphosph8
ANK_REP_REGION domain-containing protein.
    
 0.438
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.