STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glipr2GLI pathogenesis-related 2, like; Belongs to the CRISP family. (186 aa)    
Predicted Functional Partners:
rubcn
Rubicon autophagy regulator.
   
  
 0.542
LOC105419420
GLI pathogenesis-related 1a; Belongs to the CRISP family.
  
  
 0.432
LOC101064787
ShKT domain-containing protein; Belongs to the CRISP family.
  
   
 0.428
becn1
Beclin 1.
    
 
 0.426
slc46a2
Solute carrier family 46 member 2.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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