STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000063916Centrosomal protein of 83 kDa-like isoform X1. (424 aa)    
Predicted Functional Partners:
tubg1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.594
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.593
LOC101063900
Sodium channel and clathrin linker 1.
   
 0.586
ckap5
Cytoskeleton associated protein 5.
   
 0.578
uso1
USO1 vesicle transport factor.
   
 0.576
golga2
Golgin A2.
   
 
 0.562
LOC101073928
Uncharacterized protein.
   
 0.561
LOC101074373
Uncharacterized protein.
   
 0.561
rab11a
RAB11a, member RAS oncogene family.
   
 0.561
LOC101073559
RAB11a, member RAS oncogene family, like.
   
 0.561
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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