STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG28Ergosterol biosynthesis 28 homolog. (156 aa)    
Predicted Functional Partners:
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.973
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.973
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.971
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 
 0.971
LOC101075688
Phosphoethanolamine methyltransferase.
    
 
 0.970
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.964
r3hdm4
R3H domain containing 4.
   
 
 0.935
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 
 0.906
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 
 0.830
LOC101077849
Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family.
   
 
 0.830
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.