STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064730Heat shock protein 12A. (672 aa)    
Predicted Functional Partners:
LOC101075949
Heat shock protein 4 like.
   
 0.896
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.887
HSPA9
Stress-70 protein, mitochondrial.
   
 0.863
LOC115252364
Heat shock protein 9; Belongs to the heat shock protein 70 family.
   
 0.863
hspa13
Heat shock protein 70 family, member 13.
     
 0.860
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.816
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.805
hspa4
Heat shock protein 4b.
   
 0.801
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.789
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.786
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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