STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr91WD repeat domain 91. (733 aa)    
Predicted Functional Partners:
wdr81
WD repeat domain 81.
   
 
 0.951
ccdc93
Coiled-coil domain containing 93.
      
 0.566
ENSTRUP00000067866
Helicase for meiosis 1.
      
 0.564
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.548
becn1
Beclin 1.
    
 
 0.540
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
      
 0.538
ccdc22
Coiled-coil domain containing 22.
      
 0.534
Wdfy4
WDFY family member 4.
   
 
 0.526
LOC101067416
Neutral sphingomyelinase (N-SMase) activation associated factor.
   
 
 0.526
PRRC2B
Proline rich coiled-coil 2B.
      
 0.497
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.