STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abtb1Ankyrin repeat and BTB (POZ) domain containing 1. (487 aa)    
Predicted Functional Partners:
vars1
Valine--tRNA ligase.
   
 
 0.840
cul3
Cullin 3a; Belongs to the cullin family.
   
 0.642
cacul1
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.642
ibtk
Inhibitor of Bruton agammaglobulinemia tyrosine kinase.
   
0.580
wdyhv1
Uncharacterized protein.
    
 
 0.567
cars
Cysteinyl-tRNA synthetase.
    
   0.527
LOC101076077
Eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein); Belongs to the EF-1-beta/EF-1-delta family.
    
   0.526
LOC101071471
Eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein); Belongs to the EF-1-beta/EF-1-delta family.
    
   0.526
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.511
ap4b1
Adaptor related protein complex 4 subunit beta 1.
    
 0.486
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.