STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC446024Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
LOC446090
Cholinergic receptor, nicotinic, alpha 4b.
  
0.552
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.550
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.511
LOC446087
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.511
chrna9
Cholinergic receptor, nicotinic, alpha 9.
  
0.494
LOC446028
Uncharacterized protein.
  
0.493
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
0.491
LOC446029
Cholinergic receptor, nicotinic, alpha 10a.
  
0.490
LOC446016
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.445
ENSTRUP00000013993
annotation not available
  
0.444
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.