STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mical2Microtubule associated monooxygenase, calponin and LIM domain containing 2a. (981 aa)    
Predicted Functional Partners:
LOC101067938
Dickkopf WNT signaling pathway inhibitor 3a.
      
 0.542
psmd7
Proteasome 26S subunit, non-ATPase 7.
   
  
 0.542
kif20a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.541
LOC101079063
Nuclear factor of activated T cells 5a.
      
 0.537
CLEC3A
C-type lectin domain family 3 member A.
      
 0.531
agmo
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.519
PNMT
Phenylethanolamine N-methyltransferase.
      
 0.496
usp47
Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family.
      
 0.495
gcat
Glycine C-acetyltransferase.
   
  
 0.463
LOC101079160
Galectin.
      
 0.455
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.