STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (327 aa)    
Predicted Functional Partners:
H2SGM2_TAKRU
Thrombomodulin.
    
 0.579
LOC101067342
Fibulin-2-like.
    
 0.579
LOC101075681
Layilin b.
      
 0.568
LAYN
Layilin a.
      
 0.568
ENSTRUP00000079081
Complement C1q and tumor necrosis factor-related protein 9A-like isoform X1.
  
 
  0.536
H2T9T0_TAKRU
Uncharacterized protein.
  
 
  0.534
ENSTRUP00000061468
annotation not available
  
 
  0.531
ENSTRUP00000084089
Collagen alpha-4(IV) chain-like isoform X1.
  
 
  0.531
ENSTRUP00000078013
annotation not available
  
 
  0.530
col8a2
Collagen, type VIII, alpha 2.
  
 
  0.529
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.