STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000067222TBC1 domain family member 22B-like. (511 aa)    
Predicted Functional Partners:
ENSTRUP00000049547
Mitochondrial ribosomal protein S6.
    
   0.644
Mrpl21
Uncharacterized protein.
    
 
 0.584
acbd3
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.550
H2UD51_TAKRU
Mitochondrial ribosomal protein L41.
   
   0.517
ENSTRUP00000047893
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.515
mrps35
Mitochondrial ribosomal protein S35.
    
   0.513
LOC101072699
ZRAB1B, member RAS oncogene family a.
    
 
 0.506
rab1a
Uncharacterized protein.
    
 
 0.506
LOC101077537
Uncharacterized protein.
    
 
 0.506
LOC101070538
RAB1A, member RAS oncogene family.
    
 
 0.506
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.