STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063201Zgc:86598; Belongs to the protein kinase superfamily. (449 aa)    
Predicted Functional Partners:
LOC101062616
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.977
CSNK2B
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.977
dvl3
Dishevelled segment polarity protein 3a.
    
 0.945
dvl2
Dishevelled segment polarity protein 2.
    
 0.945
fundc1
FUN14 domain containing 1.
   
 
 0.945
LOC101063713
Uncharacterized protein.
   
 
 0.945
dvl1
Dishevelled segment polarity protein 1a.
    
 0.945
csnk2a2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  
0.943
LOC101067113
Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.
  
  
0.943
ctnnb1
Catenin (cadherin-associated protein), beta 1.
     
 0.912
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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