STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST13Carbohydrate sulfotransferase. (311 aa)    
Predicted Functional Partners:
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.803
chst3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.764
LOC101062081
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.753
CHST15
Carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15.
      
 0.753
csgalnact2
Hexosyltransferase.
      
 0.657
LOC101079135
Hexosyltransferase.
      
 0.600
chst6
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.559
DSEL
Dermatan sulfate epimerase like a.
      
 0.497
Gng10
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.403
LOC101080112
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.