STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcatDEF6 guanine nucleotide exchange factor c. (683 aa)    
Predicted Functional Partners:
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
  0.900
acaca
Acetyl-CoA carboxylase alpha.
   
 
  0.900
acacb
Acetyl-CoA carboxylase beta.
   
 
  0.900
ACSF3
Acyl-CoA synthetase family member 3.
     
  0.900
fasn
Coiled-coil domain containing 57.
     
  0.900
mlycd
Malonyl-CoA decarboxylase.
     
  0.800
LOC101071528
Macrophage stimulating 1 receptor a.
   
 0.616
mst1r
Macrophage stimulating 1 receptor b.
   
 0.616
met
Uncharacterized protein.
   
 0.616
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.482
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.