STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000069316annotation not available (217 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.736
ENSTRUP00000079197
annotation not available
 
 
   0.483
ENSTRUP00000060207
annotation not available
 
 
   0.482
ENSTRUP00000086978
annotation not available
 
 
   0.478
ENSTRUP00000083083
annotation not available
 
 
   0.475
ENSTRUP00000065793
annotation not available
 
 
   0.470
ENSTRUP00000085708
annotation not available
 
 
   0.469
ENSTRUP00000069854
annotation not available
 
 
   0.455
ENSTRUP00000072440
annotation not available
 
 
   0.455
cbfb
Core-binding factor subunit beta.
     
 0.440
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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