STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000069326annotation not available (777 aa)    
Predicted Functional Partners:
brcc3
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.801
babam1
BRISC and BRCA1 A complex member 1.
    
 0.801
babam2
BRISC and BRCA1 A complex member 2.
    
 0.801
brca1
Uncharacterized protein.
    
 0.763
rps27a
Ribosomal protein S27a.
    
  0.685
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.666
bard1
BRCA1 associated RING domain 1.
    
 0.666
ENSTRUP00000066652
annotation not available
 
     0.633
LOC105416732
Mediator of DNA damage checkpoint protein 1.
    
 0.562
paxip1
PAX interacting (with transcription-activation domain) protein 1.
    
 0.562
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.