STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000069478annotation not available (232 aa)    
Predicted Functional Partners:
LOC105416465
Uncharacterized protein LOC105416465.
   
 0.971
mis12
MIS12 kinetochore complex component.
    
 0.944
knl1
Knl1_RWD_C domain-containing protein.
   
 0.926
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.858
ENSTRUP00000032567
Si:dkey-6i22.5.
    
 0.846
LOC101065224
Si:dkey-6i22.5.
    
 0.846
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.831
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.815
LOC101066737
NDC80 kinetochore complex component.
   
 0.761
LOC115248170
Kinetochore protein NDC80 homolog.
   
 0.761
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.