STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072985Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
   
 0.874
LOC101071528
Macrophage stimulating 1 receptor a.
    
 0.816
mst1r
Macrophage stimulating 1 receptor b.
    
 0.816
met
Uncharacterized protein.
    
 0.816
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.808
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.739
ENSTRUP00000084234
Uncharacterized protein LOC101068331.
    
 0.688
LOC101074032
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.683
LRIT1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.683
ENSTRUP00000071066
annotation not available
    
 0.683
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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