STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063187Ubiquinol-cytochrome c reductase core protein 2b; Belongs to the peptidase M16 family. (457 aa)    
Predicted Functional Partners:
LOC101073009
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.997
LOC101067100
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.989
LOC101062555
Cytochrome c oxidase subunit 4I1.
   
 0.987
LOC101067607
Cytochrome c oxidase subunit 5B2.
   
 0.983
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
  
0.982
LOC101077128
Ubiquinol-cytochrome c reductase core protein 1.
  
0.982
LOC101079024
Cytochrome c-1.
   
 0.980
LOC115246883
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.980
ndufs4
NADH:ubiquinone oxidoreductase subunit S4.
   
 0.979
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
   
 0.976
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.