STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spryd4SPRY domain containing 4. (253 aa)    
Predicted Functional Partners:
tmem192
Transmembrane protein 192.
   
  0.681
LOC101076333
G protein-coupled receptor 89B.
    
 
 0.566
yeats4
YEATS domain containing 4.
      
 0.550
ankrd46
Ankyrin repeat domain 46b.
    
 0.457
LOC101079805
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
  
     0.420
gtpbp8
EngB-type G domain-containing protein.
   
  
 0.419
ENSTRUP00000071971
annotation not available
   
  
 0.419
ENSTRUP00000031649
Gamma-crystallin M3-like.
  
     0.408
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.