STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eml1EMAP like 1. (848 aa)    
Predicted Functional Partners:
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.767
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.760
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.727
taf9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.713
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.712
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.709
wdr19
WD repeat domain 19.
    
 0.703
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.703
LOC101077614
TPR_REGION domain-containing protein.
   
 0.702
taf1
Transcription initiation factor TFIID subunit.
   
 0.698
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.