STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgals2Galectin. (136 aa)    
Predicted Functional Partners:
nfasc
Neurofascin homolog (chicken) a.
    
 0.474
chl1
Cell adhesion molecule L1-like b.
    
 0.474
clu
Clusterin; Belongs to the clusterin family.
   
  
 0.464
LOC100653418
Prominin 1a.
      
 0.454
ptprc
Uncharacterized protein.
    
 0.452
PARD3
Par-3 family cell polarity regulator.
    
 
 0.433
slc38a11
Solute carrier family 38 member 11.
    
 
 0.404
fam20a
FAM20A.
    
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.