STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
podxl2Podocalyxin-like protein 2. (691 aa)    
Predicted Functional Partners:
sorl1
Fibronectin type-III domain-containing protein.
    
 0.708
map6d1
MAP6 domain containing 1.
    
 0.621
LOC101073940
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
  0.590
tpst1
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
  0.590
NCSTN
Nicastrin.
    
 0.579
dus2
Dihydrouridine synthase 2.
      
 0.566
tnfrsf21
Tumor necrosis factor receptor superfamily, member 21.
    
 
 0.528
H2TLH5_TAKRU
Uncharacterized protein.
   
 
  0.497
LOC101066095
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.495
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.495
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.