STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066828Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (448 aa)    
Predicted Functional Partners:
prkab1
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.589
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.589
prkag3
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.528
LOC101064981
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.528
Prkag2
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.528
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.528
tsc2
TSC complex subunit 2.
    
 0.474
ENSTRUP00000058868
Cyclin-dependent kinase 17-like isoform X5.
  
 
 0.443
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.435
LOC101061287
Ras-related GTP binding A.
    
 0.423
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.