STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062842TEA domain-containing protein. (498 aa)    
Predicted Functional Partners:
yap1
Yes-associated protein 1.
   
 0.940
vgll2
Vestigial-like family member 2a.
    
 
 0.722
vgll4
Vestigial-like family member 4b.
    
 
 0.616
LOC101061775
Vestigial like family member 4.
    
 
 0.616
ENSTRUP00000078821
annotation not available
    
 
 0.589
LOC101073250
Vestigial like 4 like.
    
 
 0.571
LOC101073250-2
Transcription cofactor vestigial-like protein 4.
    
 
 0.571
hecw1
Si:ch211-188f17.1.
    
 0.477
wwp2
E3 ubiquitin-protein ligase.
    
 0.477
SMURF2
E3 ubiquitin-protein ligase.
    
 0.477
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.