STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071102Flavodoxin_2 domain-containing protein. (288 aa)    
Predicted Functional Partners:
vkorc1
Vitamin K epoxide reductase complex subunit 1.
     
 0.927
vkorc1l1
VKc domain-containing protein.
     
 0.917
nqo1
N-ribosyldihydronicotinamide:quinone reductase 2.
  
  
 
0.903
tmco3
Transmembrane and coiled-coil domains 3.
  
 
 0.752
iyd
Iodotyrosine deiodinase.
  
 
 0.673
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.643
azin1b
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.591
rfk
Riboflavin kinase.
     
 0.531
LOC101072270
General transcription factor IIIAa.
      
 0.531
POC1A
POC1 centriolar protein A.
      
 0.531
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.