STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnpla4PNPLA domain-containing protein. (253 aa)    
Predicted Functional Partners:
LOC101073746
Si:dkey-73n8.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.910
LOC101073971
Zgc:112332; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.910
rdh12
Retinol dehydrogenase 12.
   
 
 0.910
LOC101079748
Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.910
dhrs3
Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.904
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.904
rdh10
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.904
H2SJZ6_TAKRU
Uncharacterized protein.
     
 0.904
LOC101063989
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.902
LOC101062285
Retinoid isomerohydrolase RPE65 b.
     
 0.902
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.