STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itgb1bp1Integrin beta 1 binding protein 1. (222 aa)    
Predicted Functional Partners:
krit1
KRIT1 ankyrin repeat containing.
    
 
 0.965
ccm2
CCM2 scaffold protein.
    
 
 0.792
LOC101074648
FERM domain containing 8.
    
 
 0.735
ENSTRUP00000071540
FERM domain containing 8.
    
 
 0.735
ccm2l
CCM2 like scaffold protein.
    
 
 0.701
ENSTRUP00000067003
annotation not available
    
 
 0.611
LOC101071641
Integrin beta.
    
 
 0.611
LOC101067303
Integrin beta; Belongs to the integrin beta chain family.
    
 
 0.611
LOC101061453
Integrin beta; Belongs to the integrin beta chain family.
    
 
 0.611
pdcd10
Programmed cell death 10b.
      
 0.596
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.