STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrxn1Neurexin 1b. (1505 aa)    
Predicted Functional Partners:
nlgn3
Neuroligin 3a.
   
 0.979
nlgn1
COesterase domain-containing protein.
   
 0.977
nlgn2
Neuroligin 2b.
   
 0.958
nlgn3b
Neuroligin 3b.
   
 0.958
nlgn2a
Neuroligin 2a.
   
 0.958
nlgn4a
Neuroligin 4a.
   
 0.958
LOC101065187
Uncharacterized protein.
   
 0.947
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
   
 0.844
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.824
shank3
SH3 and multiple ankyrin repeat domains protein 3 isoform X1.
   
 0.722
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.