STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kri1KRI1 homolog. (722 aa)    
Predicted Functional Partners:
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.924
krr1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.919
LOC101074491
Matrix metallopeptidase 15a.
   
 
 0.919
ENSTRUP00000080862
KRR1 small subunit processome component homolog.
   
 
 0.919
ENSTRUP00000081676
annotation not available
   
 
 0.919
utp23
UTP23 small subunit processome component.
   
 
 0.901
ngdn
Neuroguidin, EIF4E binding protein.
   
  
 0.894
cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.892
utp3
UTP3 small subunit processome component.
   
  
 0.891
ltv1
LTV1 ribosome biogenesis factor.
   
  
 0.890
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.