STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074974Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (349 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1 homolog.
    
 0.509
acd
Uncharacterized protein.
    
 0.483
golga7
Golgin A7.
   
 0.478
LOC101076213
Golgin A7 family, member Ba.
   
 0.478
rad50
RAD50 homolog, double strand break repair protein.
    
 0.410
THADA
THADA armadillo repeat containing.
      
 0.403
LOC105418034
Si:ch211-225b11.4.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.