STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000078886annotation not available (137 aa)    
Predicted Functional Partners:
cdyl
Chromodomain protein, Y-like.
   
 0.747
CDYL2
Chromodomain Y like 2.
   
 0.747
mphosph8
ANK_REP_REGION domain-containing protein.
    
 0.636
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.576
LOC101078029
Uncharacterized protein.
   
 0.559
LOC101065748
Lysine (K)-specific demethylase 6B, a.
   
 0.559
kdm6a
Lysine (K)-specific demethylase 6A, like.
   
 0.559
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.542
suz12
SUZ12 polycomb repressive complex 2 subunit b.
   
 0.540
LOC101077477
VEFS-Box domain-containing protein.
   
 0.540
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.