STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kif13aKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1893 aa)    
Predicted Functional Partners:
snx15
Sorting nexin 15.
   
 
 0.585
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
   
 
 0.566
LOC101062831
ArfGAP with dual PH domains 2.
    
 
 0.536
LOC101074698
Uncharacterized protein.
    
 
 0.536
LOC101074733
Uncharacterized protein.
    
 
 0.536
LOC101079083
Uncharacterized protein.
    
 
 0.536
ADAP1
ArfGAP with dual PH domains 1.
    
 
 0.536
kifap3
Kinesin-associated protein 3b.
     
 0.521
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
0.492
cenpe
Centromere-associated protein E isoform X4.
     
0.487
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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