STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cishCytokine-inducible SH2-containing protein. (225 aa)    
Predicted Functional Partners:
cul5
Cullin 5a; Belongs to the cullin family.
   
 0.869
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.855
LOC101070508
Elongin-B isoform X1.
    
 0.776
LOC101068670
Ubiquitin-like domain-containing protein.
    
 0.776
rnf7
Ring finger protein 7.
   
 0.753
socs5
Uncharacterized protein.
     
 0.683
cul2
Cullin 2; Belongs to the cullin family.
   
 0.659
LOC101073316
Tyrosine-protein kinase.
    
 0.623
LOC101071352
Erythropoietin receptor.
    
 
 0.611
jak1
Tyrosine-protein kinase.
    
 0.574
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.