STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grik4Glutamate receptor, ionotropic, kainate 4. (967 aa)    
Predicted Functional Partners:
LOC101079464
Glutamate receptor, ionotropic, kainate 1a.
  
 
0.620
GRIK2-2
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.620
LOC101073376
Glutamate receptor, ionotropic, kainate 1b.
  
 
0.617
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.617
LOC101075174
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.617
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
 
0.617
LOC101062540
Neuropilin (NRP) and tolloid (TLL)-like 2b.
   
 
 0.434
LOC115250008
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.400
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.