STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbx8Chromo domain-containing protein. (151 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.817
phc3
Uncharacterized protein.
    
 0.631
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.577
PCGF2
Polycomb group ring finger 2.
    
 0.577
cbx3
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
 
 0.547
LOC101073773
Polyhomeotic homolog 2b (Drosophila).
    
 0.523
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.519
PCGF3
Uncharacterized protein.
    
 0.511
cbfb
Core-binding factor subunit beta.
     
 0.502
pcgf1
Polycomb group ring finger 1.
    
 0.501
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.