STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071700Fe2OG dioxygenase domain-containing protein. (576 aa)    
Predicted Functional Partners:
LOC101063903
Protein disulfide-isomerase.
   
 0.749
p4hb
Protein disulfide-isomerase.
   
 0.749
LOC101067334
Protein disulfide-isomerase.
   
 0.608
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.608
LOC101064129
Zgc:136472.
   
 0.608
pdia3
Protein disulfide-isomerase.
   
 0.608
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
   0.521
tmx1
Thioredoxin-related transmembrane protein 1.
   
 0.434
txndc11
Thioredoxin domain containing 11.
    
 0.428
secisbp2
SECIS binding protein 2.
    
 0.428
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.