STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061379Uncharacterized protein. (650 aa)    
Predicted Functional Partners:
H2U5M4_TAKRU
UPAR/Ly6 domain-containing protein.
     
 0.637
ENSTRUP00000064310
annotation not available
 
      0.559
LOC101079753
CUB and Sushi multiple domains 3a.
 
      0.548
LOC101075452
CD59 molecule (CD59 blood group).
     
 0.512
LOC101067488
NTR domain-containing protein.
    
 0.511
LOC101071828
Complement component c3b, tandem duplicate 2.
    
 0.511
LOC101063400
NTR domain-containing protein.
    
 0.511
c3
Uncharacterized protein.
    
 0.511
LOC101065354
Complement 4B (Chido blood group).
    
 0.511
ENSTRUP00000054301
Uncharacterized protein.
    
 0.511
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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