STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prss56Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (888 aa)    
Predicted Functional Partners:
LOC101071528
Macrophage stimulating 1 receptor a.
    
 0.655
mst1r
Macrophage stimulating 1 receptor b.
    
 0.655
met
Uncharacterized protein.
    
 0.655
tmem98
Transmembrane protein 98.
      
 0.654
ecel1
Endothelin converting enzyme-like 1.
      
 0.653
mfrp
Membrane frizzled-related protein.
    
 
 0.569
nepro
Nucleolus and neural progenitor protein.
      
 0.548
maip1
Matrix AAA peptidase interacting protein 1.
      
 0.504
znf644
Zinc finger protein 644a.
    
 
 0.417
wdr90
WD repeat domain 90.
    
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.