STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072527-2Uncharacterized protein. (760 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.562
ITIH3-2
Inter-alpha-trypsin inhibitor heavy chain 3.
 
 
0.512
LOC101077791
Uncharacterized protein.
   
 0.504
birc6
Baculoviral IAP repeat containing 6.
   
 0.471
itih2
Inter-alpha-trypsin inhibitor heavy chain 2.
 
 
0.470
LOC101063214
Vitronectin a.
   
 0.460
LOC101063812
Vitronectin b.
   
 0.460
traf7
TNF receptor-associated factor 7.
   
 0.448
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.427
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.