ADAD1 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ADAD1

Adenosine deaminase domain containing 1. (532 aa)

Predicted Functional Partners:

adat3

0.593

adat2

0.548

ANKRD50

0.544

bbs7

0.543

LOC101061582

0.540

LOC101071822

0.540

SPATA5

0.488

Fgfbp2

0.484

FAT4

0.454

fgfbp1

0.450

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAD1	ANKRD50	ENSTRUP00000081642	ENSTRUP00000023426	Adenosine deaminase domain containing 1.	Ankyrin repeat domain 50.	0.544
ADAD1	FAT4	ENSTRUP00000081642	ENSTRUP00000023522	Adenosine deaminase domain containing 1.	FAT atypical cadherin 4.	0.454
ADAD1	Fgfbp2	ENSTRUP00000081642	ENSTRUP00000039739	Adenosine deaminase domain containing 1.	Fibroblast growth factor binding protein 2b.	0.484
ADAD1	LOC101061582	ENSTRUP00000081642	ENSTRUP00000023721	Adenosine deaminase domain containing 1.	Centrin, EF-hand protein, 2.	0.540
ADAD1	LOC101071822	ENSTRUP00000081642	ENSTRUP00000087310	Adenosine deaminase domain containing 1.	Nudix (nucleoside diphosphate linked moiety X)-type motif 6.	0.540
ADAD1	SPATA5	ENSTRUP00000081642	ENSTRUP00000066434	Adenosine deaminase domain containing 1.	ATPase family protein 2 homolog.	0.488
ADAD1	adat2	ENSTRUP00000081642	ENSTRUP00000055764	Adenosine deaminase domain containing 1.	CMP/dCMP-type deaminase domain-containing protein.	0.548
ADAD1	adat3	ENSTRUP00000081642	ENSTRUP00000032349	Adenosine deaminase domain containing 1.	Adenosine deaminase tRNA specific 3.	0.593
ADAD1	bbs7	ENSTRUP00000081642	ENSTRUP00000018248	Adenosine deaminase domain containing 1.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.543
ADAD1	fgfbp1	ENSTRUP00000081642	ENSTRUP00000016815	Adenosine deaminase domain containing 1.	Fibroblast growth factor binding protein 1b.	0.450
ANKRD50	ADAD1	ENSTRUP00000023426	ENSTRUP00000081642	Ankyrin repeat domain 50.	Adenosine deaminase domain containing 1.	0.544
ANKRD50	FAT4	ENSTRUP00000023426	ENSTRUP00000023522	Ankyrin repeat domain 50.	FAT atypical cadherin 4.	0.516
ANKRD50	Fgfbp2	ENSTRUP00000023426	ENSTRUP00000039739	Ankyrin repeat domain 50.	Fibroblast growth factor binding protein 2b.	0.467
ANKRD50	LOC101061582	ENSTRUP00000023426	ENSTRUP00000023721	Ankyrin repeat domain 50.	Centrin, EF-hand protein, 2.	0.511
ANKRD50	LOC101071822	ENSTRUP00000023426	ENSTRUP00000087310	Ankyrin repeat domain 50.	Nudix (nucleoside diphosphate linked moiety X)-type motif 6.	0.515
ANKRD50	SPATA5	ENSTRUP00000023426	ENSTRUP00000066434	Ankyrin repeat domain 50.	ATPase family protein 2 homolog.	0.641
ANKRD50	bbs7	ENSTRUP00000023426	ENSTRUP00000018248	Ankyrin repeat domain 50.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.525
ANKRD50	fgfbp1	ENSTRUP00000023426	ENSTRUP00000016815	Ankyrin repeat domain 50.	Fibroblast growth factor binding protein 1b.	0.451
FAT4	ADAD1	ENSTRUP00000023522	ENSTRUP00000081642	FAT atypical cadherin 4.	Adenosine deaminase domain containing 1.	0.454
FAT4	ANKRD50	ENSTRUP00000023522	ENSTRUP00000023426	FAT atypical cadherin 4.	Ankyrin repeat domain 50.	0.516