STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000082088Espin-like protein. (556 aa)    
Predicted Functional Partners:
espn
Espin.
 
      0.878
Myo3a
Myosin-IIIa isoform X1.
   
 0.772
myo3b
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.772
LOC101066299
Whirlin a.
    
 0.634
LOC105419521
Whirlin-like isoform X1.
    
 0.634
LOC101073001
Twinfilin actin-binding protein 1a.
   
 0.630
ENSTRUP00000065601
Otoancorin-like.
   
 0.501
LOC101065208
Usher syndrome 1C.
   
 0.500
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.496
ift88
Intraflagellar transport 88 homolog.
   
 0.466
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.