STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnnPinin, desmosome associated protein. (667 aa)    
Predicted Functional Partners:
sap18
Sin3A-associated protein.
    
 0.998
pnisr
PNN-interacting serine/arginine-rich protein.
   
 
 0.933
rnps1
RNA binding protein S1, serine-rich domain.
   
 0.912
LOC101074911
RNA-binding protein with serine-rich domain 1-B-like isoform X1.
   
 0.912
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.904
LOC101074005
Apoptotic chromatin condensation inducer 1b.
   
 0.902
LOC101061384
SAP domain-containing protein.
   
 0.902
LOC101074452
Mago homolog, exon junction complex subunit.
   
 0.895
srrm1
Serine/arginine repetitive matrix 1.
   
 0.888
LOC101067317
Uncharacterized protein.
   
 
 0.883
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.