STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpeb2Cytoplasmic polyadenylation element binding protein 2. (795 aa)    
Predicted Functional Partners:
onecut2
One cut domain family member.
      
 0.652
fmr1
Fragile X mental retardation 1.
    
 
 0.565
fxr1
Fragile X mental retardation, autosomal homolog 1.
    
 
 0.564
DACH1
Dachshund homolog 1-like isoform X1.
      
 0.544
LOC101067733
EPH receptor B1.
    
 
 0.530
EBF1
EBF transcription factor 1.
      
 0.526
sympk
Symplekin.
    
 
 0.489
tent2
Terminal nucleotidyltransferase 2.
   
 
 0.458
efnb1
Ephrin-B1; Belongs to the ephrin family.
      
 0.429
EEF2
Eukaryotic translation elongation factor 2.
    
 
 0.419
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.