STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101063708Synaptosomal-associated protein; Belongs to the SNAP-25 family. (207 aa)    
Predicted Functional Partners:
ENSTRUP00000076224
annotation not available
   
 0.842
LOC101073763
V-SNARE coiled-coil homology domain-containing protein.
   
 0.842
LOC101079930
Complexin 2.
   
 0.840
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.811
LOC101069563
V-SNARE coiled-coil homology domain-containing protein.
   
 0.777
LOC101072029
Vesicle-associated membrane protein 1.
   
 0.777
LOC101072029-2
Zgc:92912.
   
 0.777
ENSTRUP00000084617
annotation not available
   
 0.777
LOC101067537
C2 domain-containing protein.
   
 
 0.768
LOC101071071
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.759
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.