STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074936Si:dkey-44k1.5. (842 aa)    
Predicted Functional Partners:
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
  
0.833
cnga4
Cyclic nucleotide gated channel subunit alpha 4.
  
0.787
H2SEP8_TAKRU
Cyclic nucleotide-binding domain-containing protein.
  
0.773
H2TMF3_TAKRU
Cyclic nucleotide gated channel subunit alpha 1a.
  
0.771
LOC101065990
Cyclic nucleotide gated channel alpha 2b.
  
0.770
LOC101068564
Cyclic nucleotide-binding domain-containing protein.
  
0.770
LOC101076970
Guanylate cyclase activator 1d.
   
 0.577
LOC101068676
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.556
LOC101072412
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.556
guca1b
Guanylate cyclase activating protein 2.
   
 0.555
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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