STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101068787Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b. (241 aa)    
Predicted Functional Partners:
LOC101073984
CREB binding protein a.
    
 0.821
LOC101070643
E1A binding protein p300 a.
    
 0.747
ENSTRUP00000064066
E1A binding protein p300 b.
    
 0.747
LOC115248448
E1A binding protein p300 b.
    
 0.747
ENSTRUP00000050399
annotation not available
    
 0.563
cenpp
Centromere protein P.
    
 0.563
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
    
 0.540
tfap2c
Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).
    
 0.469
tfap2a
Transcription factor AP-2 alpha.
    
 0.469
tfap2e
Transcription factor AP-2 epsilon.
    
 0.469
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.