STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2r2Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family. (275 aa)    
Predicted Functional Partners:
LOC101063605
Ubiquitin-conjugating enzyme E2 R2.
  
  
 
0.906
LOC101073638
Cell division cycle 34 homolog (S. cerevisiae) b; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.905
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.897
rps27a
Ribosomal protein S27a.
   
 0.894
cul3
Cullin 3a; Belongs to the cullin family.
   
 0.885
trip12
Thyroid hormone receptor interactor 12.
   
 0.855
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.816
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.810
LOC115248454
RING-box protein 1.
   
 0.800
LOC101079814
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.800
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.