STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sh3bp5SH3-domain binding protein 5b (BTK-associated). (453 aa)    
Predicted Functional Partners:
LOC101073928
Uncharacterized protein.
    
 
 0.551
LOC101074373
Uncharacterized protein.
    
 
 0.551
rab11a
RAB11a, member RAS oncogene family.
    
 
 0.551
LOC101073559
RAB11a, member RAS oncogene family, like.
    
 
 0.551
LOC101065023
Ras-related protein Rab-11B-like.
    
 
 0.551
LOC101072406
Reticulon 4 receptor-like 1a.
      
 0.542
mthfs
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
   
  
 0.514
stk10
Serine/threonine kinase 10.
   
  
 0.510
LOC101067934
Uncharacterized protein.
    
 
 0.509
rabl2b
RAB, member of RAS oncogene family-like 2.
    
 
 0.509
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.